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Biochemistry
BCH
5134C Workshop in Chromatography Techniques (1).
Workshop covers the theory and practice of chromatographic techniques
to separate complex mixtures of biomolecules, including absorption, ion
exchange, size exclusion and affinity chromatography. Prerequisite: Graduate
status.
BCH
5411C Techniques in Molecular Evolution Research (5).
Ribosomal genes from related organisms are amplified by polymerase chain
reaction (PCR) and sequenced. Phylogenetic maps are made by computer from
sequence data. Students may use material from their own research. Prerequisites:
BCH 3033 and Lab, PCB 4524 and Lab or Graduate Status
BCH
6130C Workshop in DNA Synthesis and Amplification (1). Workshop
in the chemical synthesis of DNA and the amplification of specific genes
by the polymerase chain reaction (PCR). Students may synthesize DNA oligonucleotides
for use in their own research. Prerequisite: Graduate status and permission
of instructor.
BCH
6131C Workshop in Radioisotope Use and Safety (1). Workshop in
the safe use of radioisotopes in biological and biochemical experimentation,
labelling of biochemical compounds, purification of labelled compounds,
and instrumentation involved in detection of radioisotopes. Prerequisite:
Graduate status and permission of instructor.
BCH
6132C Workshop in Electrophoresis (1). Workshop in the application
of electrophoresis to biochemical and genetic experimentation. Students
may use material from their own research in the laboratory section. Prerequisite:
Graduate status and permission of instructor.
BCH
6133C Workshop in DNA Sequencing (1). Workshop in the manual and
automated sequencing of DNA. Students may sequence DNA from their own
research. Prerequisite: Graduate status and permission of instructor.
BCH
6507C Workshop in Radiometry and Spectrophotometry (1).
Interaction of light with matter (absorption, fluorescence, light scattering)
and emission (chemi- and bioluminescence); analysis of spectra and enzyme
kinetics. Prerequisite: Graduate status.
Biology
BSC
5215 Introduction to the Mechanics of Biological Systems (3).
Mechanical principles are used to analyze the structure and function of
plants and animals; especially the static of bone systems, and support
structures of plants. Prerequisite: Permission of instructor.
BSC
5345 Techniques in Scientific Diving (4).
Planning and conducting safe scientific diving operations and research.
Prerequisite: Civilian Diving Certificate (NAUI /PADI) or equivalent.
BSC
5409C Biology Laboratory Instrumentation for Secondary Teachers I (3).
Principles and practice of selected instrumental techniques. Spectrophotometry,
electrical measurements and separatory techniques. Not for BSC majors.
Prerequisites: Three undergraduate credits in physics, three in chemistry,
and six in biology.
BSC
5416C Workshop in Cell Culture Methods and Applications (1). Utilization
of primary and established cells to study growth cell cycle, chromosomes,
cell differentian. Special applications to basic problems in cell molecular
biology. Prerequisites: Permission of instructor and graduate status.
BSC
5596C Environmental Instrumentation (3). Theory and techniques
for measurement of environmental parameters of interest to field biologist.
Prerequisite: Permission of instructor.
BSC
5606 Biological Systematics (3). Systems of nomenclature and contemporary
topics in classification, including molecular evidence, numerical methods
and cladistics. Prerequisite: Permission of instructor.
BSC
5825 Wildlife Biology (3). The study of game and non game wildlife
with emphasis on management and population regulation. Prerequisite: Permission
of Instructor.
BSC
5927 Graduate Bioresource Workshop (1). This workshop is designed
to introduce Biology graduate students to the various resources available
for graduate teaching and research. Prerequisite: Graduate standing.
BSC
5931 Graduate Seminar (1).
Presentation of thesis proposal seminar or thesis defense seminar. Permission
of instructor required.
BSC
5935, 6936 Topics in Biology (1-3). An intensive study of a particular
topic or limited number of topics not otherwise offered in the curriculum.
May be repeated for credit with different subject content. Prerequisite:
Senior or graduate standing.
BSC
5936 Glaser Seminar: The Biology of Tomorrow (1). A series of lectures
by an invited, internationally recognized authority in biological topics
of current and future concern. Offered in spring semester.
BSC
5945 Supervised Teaching in Biology (1-2).
Teaching in a biological discipline, under the supervision of departmental
faculty. Prerequisite: Graduate standing.
BSC
6415C Animal Cells in Culture (3) BSC 6415L Animal Cells in Culture Lab
(2). Biology of animal cells cultured in semi-synthetic media:
cell nutrition growth, cell cycle analysis, cellular transformation and
differentiation, heterokaryons and somatic cell genetics. Prerequisite:
Consent of instructor.
BSC
6456C Microcomputer Use in Biology (1). Introduction to microcomputer
operating environments, the utility of microcomputers in biology, and
computer interfacing to biological instrumentation. Prerequisite: Permission
of instructor.
BSC
6457 Introduction to Biological Research (3). Analysis of existing
biological data and experimental design. Prerequisite: Graduate standing.
BSC
6926 Workshop in Biology (1-2).
A short intensive treatment of a specialized research topic or technique.
Prerequisite: Permission of instructor.
BSC
6948 Laboratory Visitation (1-2).
Student visits to three laboratories to learn techniques and concepts
applicable to M.S. or Ph.D. research. Prerequisite: Permission of instructor.
BSC
6971 Master's Thesis (1-12). Completion of dissertation. Prerequisite:
Permission of major professor.
BSC
7980 Ph.D. Dissertation (1-12). Completion of dissertation. Prerequisite:
Permission of Major professor.
BSC
7981 Dissertation Proposal Seminar (1). Presentation of doctoral
dissertation proposal seminar. Per-mission of major professor required.
BSC
7982 Dissertation Defense Seminar (1).
Presentation of doctoral dissertation defense seminar. Permission of major
professor required. Prerequisite: Dissertation Proposal Seminar.
Botany
BOT
5406 Algal Physiology (3). Physiology and metabolism of eukaryotic
algae, including ecological aspects of the aquatic environment and algal
roles in aquatic biogeochemical cycling. Prerequisites: BOT 4405, one
year of chemistry or instructor consent.
BOT
5515 Biochemistry of Plant Natural Products (3). Aspects of primary
and secondary plant metabolism will be covered including biosynthesis
and degradation of natural products as well as their biological/pharmacological
activity. Prerequisite: CHM 3211 or BCH 3033.
BOT
5575/5575L Photo biology (3+1). The study of basic photochemical
mechanisms as they occur in molecular biological processes such as plant
growth, animal vision, bioluminescence, and radiation damage. Prerequisite:
Permission of instructor.
BOT
5602 The Functional Ecology of Tropical Plants (3+1) The relationship
of climate and soils to the distribution and function of the major plant
groups of the tropical regions. Prerequisites: Two courses in botany or
permission of instructor.
BOT
5605C Plant Ecology (4). In-depth study of plant ecology at three
levels: individual, population, and community. Laboratory and field exercises
will examine lecture topics.
BOT
5816 Ethnobotany (3). Review the use and management of plants by
indigenous people. Discuss emerging theories in ethnobotany, examine the
role of ethnobotany in conservation and resource utilization. Prerequisites:
BOT 3810, BOT 3723, ANT 3 403, or permission of instructor.
BOT
5682C Florida Plant Communities (3). Two-week field trip to many
diverse plant communities of the state. Ecological and environmental factors
influencing plant distribution will be examined, contrasting vegetation
among sites. Prerequisite es: BSC 1010, BSC 3043 or permission of instructor.
BOT
5924 Workshop in Tropical Families (3). An introduction to important
spermatophyte families, including systematics, ecology, and conservation.
Includes laboratory and field experience. Prerequisite: Permission of
instructor.
BOT
6275 Plant Breeding Systems (3). Ecology, evolution, genetics and
development of plant breeding systems. Prerequisite: Permission of instructor.
BOT
6585C Plant Structure and Function (4). A quantitative assessment
of plant architecture, morphology and anatomy in relationship to physiology,
including the measurement of water relations, energy and gas exchange.
Prerequisites: Permission ion of instructor and graduate status.
BOT
6920 Workshop in Field Techniques in Natural History of Insect/Plant Interactions
(1). A workshop in the techniques for collecting and preserving
plants and insects for biological and taxonomic research.
BOT
6921 Workshop in Field Techniques in Pollination Biology (1). Techniques
to do a thorough study of the pollination biology of any flowering plant;
basic methods and simple instruments for field observations, measurements
and manipulations. Prerequisite: Graduate status.
BOT
6922 Workshop: Video Image Analysis in Biology (1). Workshop in
the use of video image analysis in biological research. Prerequisites:
Graduate status and permission of instructor.
BOT
6923 Workshop: Techniques in Plant Reproductive Biology (1). Workshop
in techniques for research on pollination and fertilization in plants.
Histological and microscopic examination emphasized. Prerequisites: Graduate
status and permission of instructor.
BOT
6935 Advanced Topics in Botany (3). An intensive study of particular
plant topics not otherwise offered in the curriculum. May be repeated
for credit with different subject content. Prerequisite: Graduate standing.
Cell Biology
PCB5025: Molecular Biology
Techniques Laboratory (2)
- Covers DNA and RNA extractions, digestion, electrophoresis, Southern
Analysis, RFLP analysis, PCR amplification, cloning and automated sequencing.
Prerequisites: Graduate Status or permission of instructor.
PCB
5195/5195L Histochemistry/Microtechnique (3+1).
Chemistry and use of fixatives and dyes; histochemistry emphasizes procedures
used in research and pathology labs including techniques for enzymes,
protein, carbohydrate, nucleic acids and lipids. Prerequisite: Biochemistry
or Cell Physiology.
PCB5215:
WS: Histo- and Immunocyto- Chemistry (2)
- Laboratory techniques for preparation of paraffin-embedded and
frozen sections; selected procedures to demonstrate the fundamentals of
histochemical and immunocytochemical labeling
PCB
5259 Topics in Developmental Biology (3).
Molecular and cellular mechanisms in the development or plants and animals.
Prerequisite: Senior status or permission of instructor.
PCB
5344L Tropical Ecology Field Lab (2). Field course in Costa Rica
with field work in two or more diverse habitats (rain forest, and dry
forest). Emphasis on diversity and interactions between species. Visits
to selected sites of deforestation, conservation and restoration.
PCB
5358 Everglades Research and Resources Management (3). Application
of basic skills in ecology to contemporary issues in the Everglades area,
with emphasis on the relation between research and management of wilderness,
wildlife, vegetation, water and fire. Prerequisite: PCB 3043 Ecology or
permission of instructor.
PCB
5405 Biochemical Ecology (3). Principles of chemical communication
between diverse organisms and the importance of a variety of allelochemicals
in community structure. Prerequisite: Permission of instructor.
PCB
5615 Molecular and Organismal Evolution (3). The evolutionary relationships
among nucleotides and proteins as well as the processes which yield these
relationships. The possible molecular events leading to speciation. Prerequisites:
Genetics and Biochemistry.
PCB
5665/5665L Human Genetics (3+2).
Principles and techniques in the analysis of humans and primates. Prerequisites:
PCB 3513 and lab, permission of the instructor.
PCB
5676 Evolution and Development of Sex (3). The evolutionary explanations
for the evolution of sexual reproduction and models of sexual differentiation.
Prerequisites: Genetics and Evolution or permission of instructor.
PCB
5677 Evolution and Development (3).
The models and evidence for the interaction of development and evolution,
using both plant and animal systems. Prerequisite: Permission of instructor.
PCB
5686 Population Biology (3+1) Intrinsic properties of natural and
theoretical populations and their dynamics and interactions, and responses
to disturbance. Includes field problems and computer exercises. Prerequisite:
A course in genetics, evolution, or permission of instructor. Co requisite:
PCB 56 86.
PCB
5687C Evolutionary Ecology (4). Adaptations and interactions of
plants and animals in natural and disturbed habitats. Prerequisite: PCB
3043 or equivalent.
PCB
5785 Membrane Signal Transduction (3).
Hormones and neurotransmitters as extra cellular messengers. Membrane
receptors and mechanisms of signal transduction: membrane channels and
enzymes, direct linkage and G-protein linkage. Second messengers. Prerequisites:
BCH 3033 or PCB 3203.
PCB
5786 Membrane Physiology (3). Chemical and physical properties
of the plasma membrane, its biosynthesis and functions in transport and
signal transduction. Prerequisites: PHY 3048, PHY 3049, BCH 3033 or PCB
3203.
PCB
5806 Endocrinology (3). Biochemistry, physiology and anatomy of
the endocrine systems of vertebrates and invertebrates. Steroid, peptide,
and terpenoid hormones which control reproduction, growth, and other parameters.
Prerequisites: BSC 1011, CHM 3211, one physiology course.
PCB
5835 Neurophysiology (3+1). Comparative neurophysiology; physico-chemical
mechanisms of resting and action potentials; synaptic transmission; neural
coding and integration; sensory motor function and neurophysiological
basis of behavior. Prerequisites: Biochemistry or Cell Physiology, Calculus.
PCB
5934 Topics in Skeletal Muscle Physiology (4).
Advanced discussion of some aspects of the biophysics, biochemistry and
physiology of skeletal muscle contraction action. Topics may vary from
year to year. Based on review articles and research papers. Prerequisite:
PCB 4703 or PCB 3703 and PCB 3203 or BCH 3033.
PCB6025:
Molecular and Cellular Biology I (2) -
Protein structure, catalysis, kinetics, and molecular conformation, intermolecular
forces; Prokaryotic recombination, transcription and translation, gene
regulation and genome organization. Prerequisites: Graduate Status.
PCB6027: Molecular and
Cellular Biology II (2)
- Eukaryotic recombination, transcription, translation,
gene regulation and genome organization; cellular components, cell structure,
cell division, cell signaling, development, immunology and cancer. Prerequisites:
Graduate Status.
PCB
6175C Biological Electron Microscopy (5).
Principles and techniques of transmission and scanning electron microscopy
as applied to biological materials. Lecture/laboratory combination, enrollment
limited. Prerequisite: Permission of instructor.
PCB
6235 Comparative Immunology (3). An analysis of the immune systems
and mechanisms of invertebrate and vertebrate animals. Prerequisite: Permission
of instructor.
PCB
6237 Immunogenetics (3). The impact of classical and molecular
genetic analyses on our understanding of the immune response. Prerequisite:
A course in Immunology and Genetics.
PCB
6255 Gene Expression in Animal Development (3). Introduction to
the molecular biology of animal development; DNA structure, chromatin,
transcription, post-transcriptional gene regulation molecular control
mechanisms in development. Prerequisite: Permission of instructor.
PCB
6345C Quantitative Field Ecology (6).
Methodology in the description and analysis of populations and communities.
Prerequisites: Permission of instructor and STA 3123 or equivalent.
PCB
6526 Advanced Molecular Biology (3). Molecular genetics, controlling
mechanisms, recombinant DNA, gene splicing and gene vector construction
of viral, bacterial, plant and animal systems. Prerequisite: Permission
of instructor.
PCB
6566 Chromosome Structure and Function (3). Structural organization
and function of the prokaryotic and eukaryotic chromosome: euchromatin/heterochromatin,
replication, repair, DNA sequence organization and changes during differentiate
on and development. Prerequisite: Permission of instructor.
PCB
6786 Membrane Biophysics (3). The structure and function of cell
membranes: ionic transport, passive electrical properties, and excitation.
Prerequisite: Permission of instructor.
PCB
6875 Trends in Neurobiology (2). Critical analyses and discussions
of selected research articles of current interests. Seminar format. Prerequisite:
Permission of instructor.
PCB
6935 Advanced Topics in Genetics (3). An intensive study of particular
genetical topics not otherwise offered in the curriculum. May be repeated
for credit with different subject content. Prerequisite: Graduate standing.
PCB
7675 Reproductive Immunology (3). Molecular and cellular interactions
in early development, onto genetics, and mother and fetus. Prerequisite:
Permission of instructor.
PCB
7676 Evolution and Development of Sex (3). Models of sexual differentiation
and reproduction treated in an evolutionary context. Prerequisite: Permission
of instructor.
PCB
7689 Advanced Topics in Population and Evolutionary Genetics (3).
Comparison of the synthetic and mutational drift hypotheses; relationships
between molecular and phenotypic evolutionary rates and the phenotypic
effects of various forms of mutation. Prerequisite: Permission of instructor.
Microbiology
BSC
6926 Workshop Biology: Confocal Microsco. (1).
Students will have a hands-on introduction to the
use of a confocal microscope and imaging system, exploring a range of technical capabilities. An introductory
session with background reading material and demonstration experiments will be followed by individual sampling and
studies relating to the interests of the enrolled students. Work contributing to or comprising an integral part of the students' thesis
studies will be encouraged.
MCB
5114 Microbial Diversity (3).
Analysis of metabolic and morphological diversity in bacteria in the context
of bacterial systematics. Prerequisites: MCB 3023, MCB 3023L and an additional
course in microbiology or biochemistry. Co requisite: MCB 5996L.
MCB
5114L Microbial Diversity Laboratory (1).
Laboratory to accompany Microbial Diversity lecture. Prerequisites: MCB
3023 and MCB 3023L and an additional course in microbiology or biochemistry.
Co requisite: MCB 5996.
MCB
5405 Biology of Photosynthetic Bacteria (3). MCB 5405L Biology of Photosynthetic
Bacteria Lab (1). Study of the physiology
and ecology of photosynthetic bacteria, including Blue-green algae (cyanobacteria),
purple and green bacteria, and Halo-bacteria.
MCB
5505 Virology (3) MCB 5505L Virology Lab (1). Principles and methods
of study of bacterial, plant, and animal viruses. Molecular aspects of
viral development, virus pathogens, and carcinogens. Prerequisites: Bio-chemistry,
Genetics, and Organic Chemistry.
MCB
6418 Bacterial Mineral Cycling (3). Energy and metabolic processes;
detrital food chains; carbon, nitrogen, sulfur and trace mineral cycling;
chemo autotrophy; global element cycles. Prerequisite: Permission of Instructor.
MCB
6445 Microbial Bioluminescence (3). Molecular mechanisms, physiology,
genetics and ecology of bioluminescence in micro-organisms, particularly
bacteria. Prerequisite: Permission of instructor.
MCB
6635 Marine Microbiology (3) MCB 6635L Marine Microbiology Lab (1).
Physiological-ecological study of the distribution and biology of marine
bacteria; diseases of marine animals; bacterial role in oceanic mineral
cycling. Prerequisites: MCB 3023 & L and BCH 3033 & L or MCB 4404 and
MCB 4404L.
MCB
6920 Luminescence Workshop (2). Bioluminescence and chemilum-inescent
theory and methods applied to luminous bacteria and molecular biology.
Prerequisite: Permission of the instructor.
MCB
6935 Advanced Topics in Microbiology (3). An intensive study of
particular micro biological topics not otherwise offered in the curriculum.
May be repeated for credit with different subject content. Prerequisite:
Graduate standing.
Molecular
Biology
BSC
5935 & 6936: Topics in Biology (2)
- An intensive study of a particular topic or limited number of topics
not otherwise offered in the curriculum. May be repeated for credit with
different subject content. Prerequisite: Senior or graduate status.
MCB5453:
WS: Prokaryotic Cell Signaling (2)
- Covers chemical signals used by prokaryotes for
cell-to-cell communications. Prerequisites: MCB3010 or permission of instructor.
MCB5315: WS: Cloning
(2)
MCBXXX: WS: Sequencing
(2)
MCB5315C:
WS: Prokaryotic Cloning (2)
Description of molecular genetic methods for manipulation of prokaryotic
DNA. Prerequisites: Genetics (PCB3513) and Biochemistry (BCH3033) or permission
of instructor.
MCB6935:
Advanced topics in Microbiology (2)
- An intensive study of particular microbiological topics not otherwise
offered in the curriculum. May be repeated for credit with different subject
content. Prerequisite: Graduate Status.
PCB5025: Molecular Biology
Techniques Laboratory (2)
- Covers DNA and RNA extractions, digestion, electrophoresis, Southern
Analysis, RFLP analysis, PCR amplification, cloning and automated sequencing.
Prerequisites: Graduate Status or permission of instructor.
PCB5215:
WS: Histo- and Immunocyto- Chemistry (2)
- Laboratory techniques for preparation of paraffin-embedded and
frozen sections; selected procedures to demonstrate the fundamentals of
histochemical and immunocytochemical labeling
PCB6025:
Molecular and Cellular Biology I (2)
- Protein structure, catalysis, kinetics, and molecular
conformation, intermolecular forces; Prokaryotic recombination, transcription
and translation, gene regulation and genome organization. Prerequisites:
Graduate Status.
PCB6027: Molecular and
Cellular Biology II (2)
- Eukaryotic recombination, transcription, translation,
gene regulation and genome organization; cellular components, cell structure,
cell division, cell signaling, development, immunology and cancer. Prerequisites:
Graduate Status.
PCB6935:
Advanced Topics in Genetics (2)
- An intensive study of particular genetical topics not otherwise offered
in the curriculum. May be repeated for credit with different subject content.
Prerequisite: Graduate status.
Oceanography
OCB
5634 Marine Ecology (3) OCB 5634L Marine Ecology Lab (1).
Laboratory to accompany Marine Ecology. Prerequisite: PCB 3043. Corequisite:
Marine Ecology.
OCB
5670L Techniques in Biological Oceanography (1).
A laboratory course designed to acquaint the student with biological sampling
techniques at sea. Shipboard experience will be required as part of the
course. Prerequisites: Previous courses in marine biology and permission
of instructor.
Zoology
ZOO
5266 Biology of Crustaceans (3). ZOO 5266L Biology of Crustaceans Laboratory
(1).
Morphology, physiology, systematics and evolution in crustaceans.
ZOO
5376 Animal Design and Movement (4).
Basic biomechanical and behavioral theories of how animals feed and move.
Prerequisites: BSC 1010, BSC 1011, PHY 3 053, and PHY 3054 or equivalent.
ZOO
5456 Ichthyology (3). Systematics, structure, function, ecology,
and evolution of fishes. Prerequisites: BSC 1010, BSC 1011, PCB 3043.
ZOO
5456L Ichthyology Lab (1). Accompanies ichthyology lecture. Prerequisite:
PCB 3043.
ZOO
5479 Workshop in Field Ornithology: Mark and Recapture Methods (1).
Instruction in techniques of banding wild birds, including their capture
with mist nets, identificaiton in the hand, and maintenance of federally
required records. Prerequisites: ZOO 4472 and ZOO 4472L or permission
of the instructor.
ZOO
5732 Advanced Anatomy Demonstration (1-4). Dissection and demonstration
of the human body with the emphasis on structure and function. May be
repeated to a maximum of eight credits. Prerequisite: ZOO 3733L and ZOO
3734L or permission of instructor.
ZOO
5745 Advanced Neuroanatomy (3).
In-depth knowledge of the embryonic development, structure, and function
of the human nervous system with a great d deal of clinical consideration.
Prerequisite: ZOO 4743 or permission of instructor.
ZOO
5754 Comparative Pathology (3). General mechanisms of disease and
comparative evaluation of animal diseases of specific organ systems in
various animals including fish, reptiles, birds, and mammals. Prerequisites:
ZOO 3753 or permission of instructor.
ZOO
5754L Comparative Pathology Laboratory (1). A laboratory to complement
the lecture utilizing gross specimens and histopathologic material including
glass and projection slides. Prerequisites: ZOO 3753 or permission of
instructor.
ZOO
6378C Experimental Approaches to Functional Morphology (4). The
use of mechanical analysis, electromyography, high speed cinematography
and other experimental techniques to solve problems in functional morphology.
Prerequisite: A course in Anatomy.
ZOO
6645 Workshop on Reptile and Amphibian Sampling (1). Biology and
sampling methods for reptiles and amphibians. Prerequisite: Graduate standing.
ZOO
6935 Advanced Topics in Zoology (3). An intensive study of particular
topic s not otherwise offered in the curriculum. May be repeated for credit
with different subject content. Prerequisite: Graduate standing.
(Courses
subject to change, please consult latest FIU Graduate
Catalog and the College
of Arts and Sciences for current course offerings.)
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